Training course
New York Food Safety Center of Excellence/ Cornell University
Training Opportunities
Freely available webinars and training courses covering topics relevant to genomic epidemiology
237 trainings available
If you'd like to see the full training database, you can find and download the complete Airtablehere
Webinar
New York Food Safety Center of Excellence/ Cornell University
Webinar
New York Food Safety Center of Excellence/ Cornell University
Webinar
New York Food Safety Center of Excellence/ Cornell University
EntericWebinar
New York Food Safety Center of Excellence/ Cornell University
Webinar
Washington Integrated Food Safety Center of Excellence
Webinar
Washington Integrated Food Safety Center of Excellence
Webinar
Washington Integrated Food Safety Center of Excellence
Data VizWebinar
Washington Integrated Food Safety Center of Excellence
Webinar
Association of Public Health Laboratories
Webinar
Council of State and Territorial Epidemiologists
SARS-CoV-2Webinar
Council of State and Territorial Epidemiologists
Webinar
Association of Public Health Laboratories
Data VizWebinar
Association of Public Health Laboratories
ArbovirusesWebinar
Association of Public Health Laboratories
Webinar
Association of Public Health Laboratories
Bioinformatics OverviewTraining course
European Centre for Disease Prevention and Control
Genomic EpiWebinar
Centers for Disease Control and Prevention
WastewaterTraining course
European Centre for Disease Prevention and Control
AssemblyQCTraining course
European Centre for Disease Prevention and Control
Avian InfluenzaTraining course
European Centre for Disease Prevention and Control
AMRTraining course
European Centre for Disease Prevention and Control
Training course
European Centre for Disease Prevention and Control
Bioinformatics OverviewTraining course
European Centre for Disease Prevention and Control
SARS-CoV-2Bioinformatics OverviewTraining course
AFRICA CDC PGI TRAINING
Fungal (general)Training course
TEPHINET
Bioinformatics OverviewTraining webinar
American Society for Microbiology
Bioinformatics OverviewTraining webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Bioinformatics OverviewTraining webinar
American Society for Microbiology
Bioinformatics OverviewTraining webinar
American Society for Microbiology
MetagenomicsTraining webinar
American Society for Microbiology
Infection Prevention / ControlTraining webinar
American Society for Microbiology
Infection Prevention / ControlTraining webinar
American Society for Microbiology
Data InfrastructureTraining webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Bioinformatics OverviewTraining webinar
American Society for Microbiology
Bioinformatics OverviewTraining webinar
American Society for Microbiology
Data InfrastructureTraining webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
AMRTraining webinar
American Society for Microbiology
AMRTraining webinar
American Society for Microbiology
Data InfrastructureTraining webinar
American Society for Microbiology
Bioinformatics OverviewTraining webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
QCTraining webinar
American Society for Microbiology
QCTraining webinar
American Society for Microbiology
QCTraining webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Fungal (general)Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
MetagenomicsTraining webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Bacterial (general)Training webinar
American Society for Microbiology
Bacterial (general)Training webinar
American Society for Microbiology
Viral (general)Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Bacterial (general)AMRTraining webinar
American Society for Microbiology
Bacterial (general)AMRTraining webinar
American Society for Microbiology
Bacterial (general)Fungal (general)Training webinar
American Society for Microbiology
Infection Prevention / ControlTraining webinar
American Society for Microbiology
Viral (general)Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Webinar Series
Chan Zuckerberg Initiative
Webinar Series
Chan Zuckerberg Initiative
Webinar Series
Chan Zuckerberg Initiative
Data VizWebinar Series
Chan Zuckerberg Initiative
Webinar Series
Chan Zuckerberg Initiative
Data InfrastructureWebinar Series
Chan Zuckerberg Initiative
PhylogeneticsWebinar Series
Chan Zuckerberg Initiative
Genomic EpiWebinar Series
Chan Zuckerberg Initiative
Webinar Series
Chan Zuckerberg Initiative
PhylogeneticsWebinar Series
Chan Zuckerberg Initiative
Webinar Series
Chan Zuckerberg Initiative
Webinar Series
Chan Zuckerberg Initiative
Mycobacterium tuberculosisWebinar Series
Chan Zuckerberg Initiative
Webinar Series
Chan Zuckerberg Initiative
MumpsWebinar Series
Chan Zuckerberg Initiative
Webinar Series
Chan Zuckerberg Initiative
SARS-CoV-2Webinar Series
Chan Zuckerberg Initiative
Webinar Series
Chan Zuckerberg Initiative
MpoxWebinar Series
Chan Zuckerberg Initiative
Webinar Series
Chan Zuckerberg Initiative
Webinar Series
Chan Zuckerberg Initiative
Genomic EpiWebinar Series
Chan Zuckerberg Initiative
Genomic EpiWebinar Series
WHO / PAHO
Genomic EpiWebinar Series
WHO / PAHO
Genomic EpiTraining webinar
Centers for Disease Control and Prevention
Genomic EpiTraining webinar
Centers for Disease Control and Prevention
SARS-CoV-2Training webinar
Centers for Disease Control and Prevention
PhylogeneticsTraining webinar
Centers for Disease Control and Prevention
SARS-CoV-2Training webinar
Centers for Disease Control and Prevention
SARS-CoV-2Training webinar
Centers for Disease Control and Prevention
SARS-CoV-2Training webinar
Centers for Disease Control and Prevention
SARS-CoV-2Training webinar
Centers for Disease Control and Prevention
SARS-CoV-2Training webinar
Centers for Disease Control and Prevention
SARS-CoV-2Training webinar
Centers for Disease Control and Prevention
SARS-CoV-2Training webinar
Centers for Disease Control and Prevention
SARS-CoV-2Training webinar
Centers for Disease Control and Prevention
SARS-CoV-2Data VizTraining webinar
Centers for Disease Control and Prevention
SARS-CoV-2Data VizTraining webinar
Centers for Disease Control and Prevention
SARS-CoV-2PhylogeneticsTraining webinar
Centers for Disease Control and Prevention
SARS-CoV-2Data VizTraining webinar
Centers for Disease Control and Prevention
SARS-CoV-2Training webinar
Centers for Disease Control and Prevention
SARS-CoV-2Genomic EpiTraining webinar
Centers for Disease Control and Prevention
Genomic EpiWebinar
PHA4GE
SARS-CoV-2Webinar
PHA4GE
Webinar
PHA4GE
AMRWebinar
PHA4GE
MetagenomicsWebinar
PHA4GE
Bacterial (general)Webinar
PHA4GE
Data InfrastructureWebinar
PHA4GE
EthicsWebinar
PHA4GE
Webinar
PHA4GE
Webinar
PHA4GE
EntericWebinar
WHO
Infection Prevention / ControlWebinar
Labroots
Genomic EpiWebinar Series
Washington State Department of Health
Genomic EpiWebinar Series
Washington State Department of Health
Genomic EpiWebinar Series
Washington State Department of Health
Genomic EpiBacterial (general)Webinar Series
Washington State Department of Health
Genomic EpiBacterial (general)Webinar Series
Washington State Department of Health
Genomic EpiBacterial (general)Webinar Series
Washington State Department of Health
MetagenomicsGenomic EpiBioinformaticsWorkshop
The National Academies
Genomic EpiBioinformaticsPublic Health ApplicationWorkshop
The National Academies
Genomic EpiBioinformaticsPublic Health ApplicationWastewaterAMR
The National Academies
Genomic EpiBioinformaticsData InfrastructureWorkshop
The National Academies
Data InfrastructureEthicsWorkshop
The National Academies
Genomic EpiBioinformaticsWorkshop
The National Academies
Genomic EpiBioinformaticsWorkshop
The National Academies
Genomic EpiBioinformaticsWorkforce DevelopmentFundingProgram Building
The National Academies
Genomic EpiBioinformaticsWorkshop
The National Academies
Genomic EpiBioinformaticsWorkshop
The National Academies
SARS-CoV-2QCTraining course
Association of Public Health Laboratories
SARS-CoV-2NextstrainPhylogeneticsGenomic EpiTraining course
Association of Public Health Laboratories
BioinformaticsOngoing Webinars Page
StaPH-B
Ongoing Webinars Page
Phyloseminar
West Nile VirusMetagenomicsWebinar Series
Massachusetts Department of Public Health
West Nile VirusWebinar Series
Massachusetts Department of Public Health
InfluenzaWebinar Series
Massachusetts Department of Public Health
InfluenzaWebinar Series
Massachusetts Department of Public Health
Mycobacterium tuberculosisWebinar Series
Massachusetts Department of Public Health
Mycobacterium tuberculosisWebinar Series
Massachusetts Department of Public Health
BioinformaticsGitWebinar Series
Massachusetts Department of Public Health
BioinformaticsGitWebinar Series
Massachusetts Department of Public Health
Webinar Series
Michigan Department of Health and Human Services
Webinar Series
Michigan Department of Health and Human Services
Bioinformatics OverviewWebinar Series
Michigan Department of Health and Human Services
Genomic EpiWebinar Series
Michigan Department of Health and Human Services
AMRData VizTraining course
European Centre for Disease Prevention and Control
Bacterial (general)CholeraGenomic EpiWebinar
European Centre for Disease Prevention and Control
PhylogeneticsWebinar Series
European Centre for Disease Prevention and Control
WaterborneLeptospirosisWebinar Series
European Centre for Disease Prevention and Control
WaterborneWebinar Series
European Centre for Disease Prevention and Control
Bordatella pertussisWebinar Series
European Centre for Disease Prevention and Control
RSVWebinar Series
European Centre for Disease Prevention and Control
C. diphtheriaeWebinar Series
European Centre for Disease Prevention and Control
BioinformaticsWebinar Series
European Centre for Disease Prevention and Control
NanoporeWebinar Series
European Centre for Disease Prevention and Control
KlebsiellaWebinar Series
European Centre for Disease Prevention and Control
BioinformaticsWebinar Series
European Centre for Disease Prevention and Control
Data VizWebinar Series
European Centre for Disease Prevention and Control
BioinformaticsTraining course
Wellcome Connecting Science
BioinformaticsTraining course
Wellcome Connecting Science
EurkaryotesTraining course
Wellcome Connecting Science
AMRTraining course
Wellcome Connecting Science
Mycobacterium tuberculosisWebinar Series
PHA4GE
PhylogeneticsWebinar Series
PHA4GE
BioinformaticsWebinar Series
PHA4GE
BioinformaticsWebinar Series
PHA4GE
Viral (general)Webinar Series
Washington State Department of Health
Viral (general)Webinar Series
Washington State Department of Health
Viral (general)Webinar Series
Washington State Department of Health
Viral (general)Webinar Series
Washington State Department of Health
SARS-CoV-2Webinar
Council of State and Territorial Epidemiologists
HIVWebinar
Council of State and Territorial Epidemiologists
Data VizData InfrastructureWebinar
Council of State and Territorial Epidemiologists
Data VizWebinar
Council of State and Territorial Epidemiologists
HealthcareWebinar
Council of State and Territorial Epidemiologists
HantavirusWebinar
Council of State and Territorial Epidemiologists
Data VizTraining course
Physalia Courses
BioinformaticsTraining course
Pathogen Genomics Centers of Excellence (PGCoE)
PhylogeneticsBioinformatics OverviewPublic Health ApplicationTraining course
Pathogen Genomics Centers of Excellence (PGCoE)
EntericPublic Health Application
DTU
AMRTraining course
DTU
AMRTraining course
Fleming Fund
Bacterial (general)BioinformaticsTraining course
DTU
SARS-CoV-2Training course
DTU
Genomic EpiNCBITraining course
Council of State and Territorial Epidemiologists
EntericPhylogeneticsTraining course
European Centre for Disease Prevention and Control
Genomic EpiPhylogeneticsTraining course
European Centre for Disease Prevention and Control
Bacterial (general)TaxonomyTraining course
European Centre for Disease Prevention and Control
Genomic EpiTraining course
Bioinformatics Canada
Genomic EpiPublic Health ApplicationWebinar
WHO
PhylodynamicsWebinar Series
Fogarty International Center at NIH
BioinformaticsDatabasesTraining course
Swiss Institute of Bioinformatics
BioinformaticsProgrammingTraining course
Sandbox.bio
BioinformaticsWastewaterTraining course
PHA4GE
BioinformaticsProgrammingTraining course
PHA4GE
BioinformaticsProgrammingTraining course
PHA4GE
Training course
Wellcome Sanger Institute
BioinformaticsTraining course
Johns Hopkins University
BioinformaticsTraining course
Wellcome Connecting Science
Training course
Wellcome Connecting Science
Training course
Wellcome Connecting Science
BioinformaticsTraining course
Wellcome Connecting Science
BioinformaticsWorkforce DevelopmentTraining course
Wellcome Connecting Science
Training course
Fogarty International Center, National Institutes of Health
BioinformaticsAMRTraining course
Wellcome Connecting Science
BioinformaticsTraining course
UPenn/CHOP
BioinformaticsProgrammingTraining course
Data Carpentry
BioinformaticsProgrammingTraining course
Data Carpentry
BioinformaticsProgrammingTraining course
Data Carpentry
BioinformaticsProgrammingTraining course
Data Carpentry
Data InfrastructureGenomic EpiTraining course
Data Carpentry
Data VizGenomic EpiTraining course
Data Carpentry
Training course
EMBL-EBI Training
SARS-CoV-2Webinar
EMBL-EBI Training
AMRTraining course
EMBL-EBI Training
BioinformaticsViral (general)Training course
EMBL-EBI Training
PhylogeneticsTraining course
EMBL-EBI Training
BioinformaticsMetagenomicsGenomic EpiTraining course
EMBL-EBI Training
BioinformaticsTraining course
EMBL-EBI Training
BioinformaticsTraining course
EMBL-EBI Training
BioinformaticsGenomic EpiTraining course
EMBL-EBI Training
BioinformaticsTraining course
EMBL-EBI Training
BioinformaticsTraining course
EMBL-EBI Training
BioinformaticsTraining course
EMBL-EBI Training
Genomic EpiTraining course
EMBL-EBI Training
BioinformaticsSequencing MethodsTraining course
Pathogen Genomics Centers of Excellence (PGCoE)
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Self-Study Exercises
Hands-on tutorials and exercises for self-paced learning in genomic epidemiology.
Digital Epidemiology Workshop →
Hands on exercise using web-based tools (EpiCollect, Pathogenwatch, Data-flo, Microreact) to conduct a genomic epidemiology investigation.
Centre for Genomic Pathogen Surveillance
Infectious Disease Genomic Epidemiology 2023 →
This 4-day course from CBW provides an introduction to genomic epidemiology analysis followed by hands-on practical tutorials demonstrating the use of selected analysis tools. The tutorials are designed as self-contained units that include example data and detailed instructions.
Bioinformatics.ca
Whole Genome Multi Locus Sequence Typing Activity →
This activity was developed by the New York Integrated Food Safety Center of Excellence to provide public health staff or students with an understanding of how whole genome sequencing (WGS), and particularly whole genome multi locus sequence typing (wgMLST), works as a subtyping method.
New York Food Safety Center of Excellence / Cornell University
Bioinformatics for Genomic Epidemiology March 2024 →
An introductory course on Pathogen Bioinformatics for Genomic Epidemiology. Topics covered include Introduction Unix/Linux, command line, shell scripting, containers, Galaxy, Nextflow, R, and a cholera case study.
SANBI (South African National Bioinformatics Institute)